PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.JI81D
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 458aa    MW: 49608 Da    PI: 8.702
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.JI81DgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.42.9e-09299346455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Aradu.JI81D 299 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 346
                  8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.06E-14293353IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.56E-9293348No hitNo description
Gene3DG3DSA:4.10.280.107.6E-15295353IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.663295345IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.2E-6299346IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.6E-8301351IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
MVSSPSTAAP NFNMIQNDNS FVIRELIGKL GTIGGSSAEI SPHSQTVALY NNNNTTPSSS  60
CYSTPLNSPP KLNMPKPPPP SSSMALNSAT VAEFSADPGF AERAAKFSCF GSRSFNGRTT  120
TTTTTTTTSP LVMINNHNNN NNGAELTHQR SNPIHRVSSS PSLKSLGSQM EKICSSPLEM  180
AANSSQEEST ISEQNPNVEG AALKIASSSD MSSRKRKGSS RAKAKDSTKG GEGSEESNAK  240
RSKGNEGEGN ENNGRVKVEE ESKGEEKQQQ NNKSNNSKPP EPPKDYIHVR ARRGQATDSH  300
SLAERVRREK ISERMKLLQD LVPGCNKVTG KALMLDEIIN YVQSLQRQFL SMKLASVNTR  360
MDLSIENIVP KDIFQSNHSL AHPIFPIDSS ATPFYGHQSQ QNPVIHNNIP NGSLPHNSVD  420
PLDSALCQTL GMQLPQLNAF NEIGSQVINN NNNTNNAY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015938868.10.0PREDICTED: transcription factor bHLH78
TrEMBLA0A0L9U5U71e-180A0A0L9U5U7_PHAAN; Uncharacterized protein
STRINGGLYMA08G46040.11e-171(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF25303480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.12e-55bHLH family protein